Ergo Proxy (2006)

Set in a desolate future where humanity resides in mechanized domes, life is dictated by A.I. systems. Here, humans are artificially created, coexisting with androids called autoreivs. Re-l Mayer, a rare individual in Romdeau with the ability to think critically, begins to challenge the city's seemingly perfect existence. Her privileged upbringing and the affection of scientist Daedalus grant her more autonomy, yet doubts arise as proxies wreak havoc. Influenced by the enigmatic Vincent, Re-l embarks on a journey beyond the city limits to unravel the secrets of "the awakening" and confront her reality.